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BnVIR
Brassica napus
variation information resource
eg:
AT5G10140
or
FLC
————Bridging the genotype–phenotype gap to accelerate mining candidate variation of traits in
Brassica napus
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Sample
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Variation
Single-locus model
ZS11
Darmor
Multi-locus model
ZS11
Darmor
Variation-phenotype association (GWAS)
ZS11
Darmor
Customized phenotype
ZS11
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Evolution
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ZS11
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Tools
Blast@BnIR
Seq fetch@BnIR
Gene index@BnIR
Variant annotations
Data2geomap
LDheatmap
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Methods
Pipeline
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Darmor
Variation–phenotype association (GWAS)
Threshold
-Log
10
(
p
value)
Trait
Seed oil content (SOC)(Tang et al., 2021)
Palmitic acid (C16:0) (Zhao et al., 2019)
Stearic acid (C18:0)(Zhao et al., 2019)
Oleic acid (C18:1)(Zhao et al., 2019)
Linoleic acid (C18:2)(Zhao et al., 2019)
Linolenic acid (C18:3)(Zhao et al., 2019)
Eicosenoic acid (C20:1)(Zhao et al., 2019)
Erucic acid (C22:1)(Zhao et al., 2019)
Seed glucosinolate content (SGC)(Zhao et al., 2019)
Plant height (Liu et al., 2016)
Main inflorescence length (Liu et al., 2016)
Main inflorescence silique number (Liu et al., 2016)
Silique length (Liu et al., 2016)
Thousand seed weight (Liu et al., 2016)
Seed number per silique (Liu et al., 2016)
Branch height (Liu et al., 2016)
Branch number (Liu et al., 2016)
Flowering time (Wu et al., 2019)
submit
Note : no data available , please recheck your input format.
Navigational Manhattan Plot (Trait:
)
)
Gene/Region
submit
e.g.
A08:10450000..10500000
or
A08
or
BnaA08g11360D