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BnVIR
Brassica napus
variation information resource
eg:
AT5G10140
or
FLC
————Bridging the genotype–phenotype gap to accelerate mining candidate variation of traits in
Brassica napus
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Sample
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Variation
Single-locus model
ZS11
Darmor
Multi-locus model
ZS11
Darmor
Variation-phenotype association (GWAS)
ZS11
Darmor
Customized phenotype
ZS11
Darmor
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ZS11
Darmor
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Darmor
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ZS11
Darmor
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ZS11
Darmor
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Tools
Blast@BnIR
Seq fetch@BnIR
Gene index@BnIR
Variant annotations
Data2geomap
LDheatmap
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+ Accession information
Accession information.xlsx
+ Variation information(Genome:
ZS11
)
bna2311_ZS11_SNP.A01.vcf.gz
bna2311_ZS11_SNP.A02.vcf.gz
bna2311_ZS11_SNP.A03.vcf.gz
bna2311_ZS11_SNP.A04.vcf.gz
bna2311_ZS11_SNP.A05.vcf.gz
bna2311_ZS11_SNP.A06.vcf.gz
bna2311_ZS11_SNP.A07.vcf.gz
bna2311_ZS11_SNP.A08.vcf.gz
bna2311_ZS11_SNP.A09.vcf.gz
bna2311_ZS11_SNP.A10.vcf.gz
bna2311_ZS11_SNP.C01.vcf.gz
bna2311_ZS11_SNP.C02.vcf.gz
bna2311_ZS11_SNP.C03.vcf.gz
bna2311_ZS11_SNP.C04.vcf.gz
bna2311_ZS11_SNP.C05.vcf.gz
bna2311_ZS11_SNP.C06.vcf.gz
bna2311_ZS11_SNP.C07.vcf.gz
bna2311_ZS11_SNP.C08.vcf.gz
bna2311_ZS11_SNP.C09.vcf.gz
bna2311_ZS11_SNP.scaffold.vcf.gz
+ Variation information(Genome:
Darmor
)
bna2311_Darmor_SNP.chrA01.vcf.gz
bna2311_Darmor_SNP.chrA02.vcf.gz
bna2311_Darmor_SNP.chrA03.vcf.gz
bna2311_Darmor_SNP.chrA04.vcf.gz
bna2311_Darmor_SNP.chrA05.vcf.gz
bna2311_Darmor_SNP.chrA06.vcf.gz
bna2311_Darmor_SNP.chrA07.vcf.gz
bna2311_Darmor_SNP.chrA08.vcf.gz
bna2311_Darmor_SNP.chrA09.vcf.gz
bna2311_Darmor_SNP.chrA10.vcf.gz
bna2311_Darmor_SNP.chrC01.vcf.gz
bna2311_Darmor_SNP.chrC02.vcf.gz
bna2311_Darmor_SNP.chrC03.vcf.gz
bna2311_Darmor_SNP.chrC04.vcf.gz
bna2311_Darmor_SNP.chrC05.vcf.gz
bna2311_Darmor_SNP.chrC06.vcf.gz
bna2311_Darmor_SNP.chrC07.vcf.gz
bna2311_Darmor_SNP.chrC08.vcf.gz
bna2311_Darmor_SNP.chrC09.vcf.gz
bna2311_Darmor_SNP.random.vcf.gz
+ Phenotype information
Flowering_time_data_from_Wu_2019.xlsx
Flowering_time_data_from_Song_2020.xlsx
+ Transcription information
Gene.expression.From.Tang_2021
+ Tutorial
Tutorial.pdf