Bn-eQTL database

Search For eGWAS Data By SNP:

Searched BnvaA0100139789 Results:

20 day associated information:

Gene_name	SNP	SNP_Chr	SNP_ChrPos	PValue
BnaA09T0229800ZS	BnvaA0100139789	chrA01	139789	19.8243

40 day associated information:

Gene_name	SNP	SNP_Chr	SNP_ChrPos	PValue
BnaC09T0354100ZS	BnvaA0100139789	chrA01	139789	18.6944

LeadSNP nearby genetic information:

Name	Dist	Chrom	start	end	Symbol	Full_name	TF_family	Ara_gene	Description
BnaA01T0001700ZS	80451	chrA01	220240	224025	CSLD4	cellulose synthase like D4	unknown	AT4G38190	Cellulose synthase-like protein D4
BnaA01T0001400ZS	65861	chrA01	205650	206010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0000100ZS	-14976	chrA01	124813	125347	unknown	unknown	unknown	AT4G38700	Dirigent protein 15
BnaA01T0002000ZS	96670	chrA01	236459	240084	STY46	serine/threonine/tyrosine kinase 46	unknown	AT4G38470	ACT-like protein tyrosine kinase family protein
BnaA01T0001500ZS	72353	chrA01	212142	214987	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0001200ZS	59686	chrA01	199475	202154	LAZ1	LAZARUS 1	unknown	AT4G38360	Protein LAZ1
BnaA01T0001100ZS	52861	chrA01	192650	193010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0000200ZS	12939	chrA01	152728	153872	unknown	unknown	unknown	AT4G38670	Pathogenesis-related thaumatin superfamily protein
BnaA01T0001000ZS	43884	chrA01	183673	186517	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0001300ZS	63124	chrA01	202913	203851	WDL1	WVD2-like 1	unknown	AT3G04630	Protein WVD2-like 1
BnaA01T0000300ZS	16537	chrA01	156326	156924	unknown	unknown	unknown	AT2G24700	B3 domain-containing protein REM10
BnaA01T0000400ZS	18117	chrA01	157906	158420	unknown	unknown	unknown	AT4G38495	CONTAINS InterPro DOMAIN/s: YL1 nuclear%2C C-terminal (InterPro:IPR013272)%3B Has 279 Blast hits to 279 proteins in 147 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 94%3B Fungi - 133%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
BnaA01T0000800ZS	34866	chrA01	174655	178440	CSLD4	cellulose synthase like D4	unknown	AT4G38190	Cellulose synthase-like protein D4
BnaA01T0000900ZS	43611	chrA01	183400	184249	EXPA20	expansin A20	unknown	AT4G38210	Expansin-A20
BnaA01T0000500ZS	18822	chrA01	158611	162227	STY46	serine/threonine/tyrosine kinase 46	unknown	AT4G38470	ACT-like protein tyrosine kinase family protein
BnaA01T0000700ZS	28647	chrA01	168436	169421	EXPL1	EXPANSIN L1	unknown	AT3G45970	Expansin-like A1
BnaA01T0001900ZS	91716	chrA01	231505	232577	SSU	small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase	unknown	AT4G38460	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit%2C chloroplastic
BnaA01T0000600ZS	26318	chrA01	166107	167179	SSU	small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase	unknown	AT4G38460	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit%2C chloroplastic
BnaA01T0001600ZS	74622	chrA01	214411	215260	EXPA20	expansin A20	unknown	AT4G38210	Expansin-A20
BnaA01T0001800ZS	89472	chrA01	229261	230246	EXPL1	EXPANSIN L1	unknown	AT3G45970	Expansin-like A1

Bn-eQTL

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SNP name (e.g.BnvaA0211205896/... ):