Bn-eQTL database

Search For eGWAS Data By SNP:

There was no genetic information associated with 40 day 'BnvaA0100195633'

Searched BnvaA0100195633 Results:

20 day associated information:

Gene_name	SNP	SNP_Chr	SNP_ChrPos	PValue
BnaC03T0526200ZS	BnvaA0100195633	chrA01	195633	14.5565

LeadSNP nearby genetic information:

Name	Dist	Chrom	start	end	Symbol	Full_name	TF_family	Ara_gene	Description
BnaA01T0001700ZS	24607	chrA01	220240	224025	CSLD4	cellulose synthase like D4	unknown	AT4G38190	Cellulose synthase-like protein D4
BnaA01T0001400ZS	10017	chrA01	205650	206010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0000100ZS	-70820	chrA01	124813	125347	unknown	unknown	unknown	AT4G38700	Dirigent protein 15
BnaA01T0002000ZS	40826	chrA01	236459	240084	STY46	serine/threonine/tyrosine kinase 46	unknown	AT4G38470	ACT-like protein tyrosine kinase family protein
BnaA01T0001500ZS	16509	chrA01	212142	214987	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0002500ZS	91252	chrA01	286885	287203	SAUR16	SMALL AUXIN UPREGULATED RNA 16	unknown	AT4G38860	SAUR-like auxin-responsive protein family
BnaA01T0001200ZS	3842	chrA01	199475	202154	LAZ1	LAZARUS 1	unknown	AT4G38360	Protein LAZ1
BnaA01T0002200ZS	49208	chrA01	244841	245988	unknown	unknown	unknown	AT4G38670	Pathogenesis-related thaumatin superfamily protein
BnaA01T0001100ZS	-2983	chrA01	192650	193010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0000200ZS	-42905	chrA01	152728	153872	unknown	unknown	unknown	AT4G38670	Pathogenesis-related thaumatin superfamily protein
BnaA01T0002600ZS	95516	chrA01	291149	292778	ATASE3	GLN phosphoribosyl pyrophosphate amidotransferase 3	unknown	AT4G38880	Amidophosphoribosyltransferase 3%2C chloroplastic
BnaA01T0001000ZS	-11960	chrA01	183673	186517	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0001300ZS	7280	chrA01	202913	203851	WDL1	WVD2-like 1	unknown	AT3G04630	Protein WVD2-like 1
BnaA01T0002400ZS	85644	chrA01	281277	281574	SAUR14	SMALL AUXIN UPREGULATED RNA 14	unknown	AT4G38840	SAUR-like auxin-responsive protein family
BnaA01T0002100ZS	44642	chrA01	240275	240789	unknown	unknown	unknown	AT4G38495	CONTAINS InterPro DOMAIN/s: YL1 nuclear%2C C-terminal (InterPro:IPR013272)%3B Has 279 Blast hits to 279 proteins in 147 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 94%3B Fungi - 133%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
BnaA01T0002700ZS	97226	chrA01	292859	295957	unknown	unknown	unknown	AT4G38890	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
BnaA01T0000300ZS	-39307	chrA01	156326	156924	unknown	unknown	unknown	AT2G24700	B3 domain-containing protein REM10
BnaA01T0002300ZS	51495	chrA01	247128	247726	unknown	unknown	unknown	unknown	unknown protein
BnaA01T0000400ZS	-37727	chrA01	157906	158420	unknown	unknown	unknown	AT4G38495	CONTAINS InterPro DOMAIN/s: YL1 nuclear%2C C-terminal (InterPro:IPR013272)%3B Has 279 Blast hits to 279 proteins in 147 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 94%3B Fungi - 133%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
BnaA01T0000800ZS	-20978	chrA01	174655	178440	CSLD4	cellulose synthase like D4	unknown	AT4G38190	Cellulose synthase-like protein D4
BnaA01T0000900ZS	-12233	chrA01	183400	184249	EXPA20	expansin A20	unknown	AT4G38210	Expansin-A20
BnaA01T0000500ZS	-37022	chrA01	158611	162227	STY46	serine/threonine/tyrosine kinase 46	unknown	AT4G38470	ACT-like protein tyrosine kinase family protein
BnaA01T0000700ZS	-27197	chrA01	168436	169421	EXPL1	EXPANSIN L1	unknown	AT3G45970	Expansin-like A1
BnaA01T0001900ZS	35872	chrA01	231505	232577	SSU	small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase	unknown	AT4G38460	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit%2C chloroplastic
BnaA01T0000600ZS	-29526	chrA01	166107	167179	SSU	small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase	unknown	AT4G38460	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit%2C chloroplastic
BnaA01T0001600ZS	18778	chrA01	214411	215260	EXPA20	expansin A20	unknown	AT4G38210	Expansin-A20
BnaA01T0001800ZS	33628	chrA01	229261	230246	EXPL1	EXPANSIN L1	unknown	AT3G45970	Expansin-like A1

Bn-eQTL

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