Bn-eQTL database

Search For eGWAS Data By SNP:

There was no genetic information associated with 40 day 'BnvaA0100285841'

Searched BnvaA0100285841 Results:

20 day associated information:

Gene_name	SNP	SNP_Chr	SNP_ChrPos	PValue
BnaA01T0117900ZS	BnvaA0100285841	chrA01	285841	15.4657

LeadSNP nearby genetic information:

Name	Dist	Chrom	start	end	Symbol	Full_name	TF_family	Ara_gene	Description
BnaA01T0001700ZS	-65601	chrA01	220240	224025	CSLD4	cellulose synthase like D4	unknown	AT4G38190	Cellulose synthase-like protein D4
BnaA01T0001400ZS	-80191	chrA01	205650	206010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0003300ZS	45878	chrA01	331719	334664	SID1	SALICYLIC ACID INDUCTION DEFICIENT 1	unknown	AT4G39030	Enhanced disease susceptibility 5
BnaA01T0002000ZS	-49382	chrA01	236459	240084	STY46	serine/threonine/tyrosine kinase 46	unknown	AT4G38470	ACT-like protein tyrosine kinase family protein
BnaA01T0004300ZS	84757	chrA01	370598	371241	unknown	unknown	unknown	AT4G39200	40S ribosomal protein S25-4
BnaA01T0003600ZS	68681	chrA01	354522	356104	RD19A	RESPONSIVE TO DEHYDRATION 19A	unknown	AT4G39090	Cysteine proteinase RD19a
BnaA01T0001500ZS	-73699	chrA01	212142	214987	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0003200ZS	35327	chrA01	321168	324571	GH9B18	glycosyl hydrolase 9B18	unknown	AT4G39010	Endoglucanase 24
BnaA01T0003800ZS	73256	chrA01	359097	362129	BUPS1	Buddhas Paper Seal 1	unknown	AT4G39110	Probable receptor-like protein kinase At4g39110
BnaA01T0003100ZS	25207	chrA01	311048	313360	GH9B17	glycosyl hydrolase 9B17	unknown	AT4G39000	Endoglucanase 23
BnaA01T0003400ZS	55411	chrA01	341252	342698	STH7	SALT TOLERANCE HOMOLOG 7	unknown	AT4G39070	B-box zinc finger protein 20
BnaA01T0002500ZS	1044	chrA01	286885	287203	SAUR16	SMALL AUXIN UPREGULATED RNA 16	unknown	AT4G38860	SAUR-like auxin-responsive protein family
BnaA01T0001200ZS	-86366	chrA01	199475	202154	LAZ1	LAZARUS 1	unknown	AT4G38360	Protein LAZ1
BnaA01T0002200ZS	-41000	chrA01	244841	245988	unknown	unknown	unknown	AT4G38670	Pathogenesis-related thaumatin superfamily protein
BnaA01T0001100ZS	-93191	chrA01	192650	193010	At4g38250	unknown	unknown	AT4G38250	Amino acid transporter ANTL2
BnaA01T0003500ZS	61924	chrA01	347765	354042	VHA-A3	vacuolar proton ATPase A3	unknown	AT4G39080	V-type proton ATPase subunit a3
BnaA01T0003500ZS.1	63564	chrA01	349405	354042	VHA-A3	vacuolar proton ATPase A3	unknown	AT4G39080	V-type proton ATPase subunit a3
BnaA01T0003900ZS	76567	chrA01	362408	363469	IMPL2	myo-inositol monophosphatase like 2	unknown	AT4G39120	myo-inositol monophosphatase like 2
BnaA01T0004600ZS	93630	chrA01	379471	379864	EC1.4	EGG CELL 1.4	unknown	AT4G39340	Egg cell-secreted protein 1.4
BnaA01T0003000ZS	18975	chrA01	304816	309858	FBA2	fructose-bisphosphate aldolase 2	unknown	AT4G38970	FBA; Fructose 1,6 bis phosphate aldolase; Plastid; Probable fructose-bisphosphate aldolase 2%2C chloroplastic
BnaA01T0002800ZS	10958	chrA01	296799	297762	BPC5	basic pentacysteine 5	unknown	AT4G38910	Protein BASIC PENTACYSTEINE5
BnaA01T0004500ZS	89159	chrA01	375000	375760	RBGA6	RNA-binding glycine-rich protein A6	unknown	AT4G39260	Glycine-rich RNA-binding protein 8
BnaA01T0004000ZS	77846	chrA01	363687	364290	unknown	unknown	unknown	AT4G39130	Dehydrin family protein
BnaA01T0002600ZS	5308	chrA01	291149	292778	ATASE3	GLN phosphoribosyl pyrophosphate amidotransferase 3	unknown	AT4G38880	Amidophosphoribosyltransferase 3%2C chloroplastic
BnaA01T0001000ZS	-102168	chrA01	183673	186517	AQI	aquaporin interactor	unknown	AT4G38220	Peptidase M20/M25/M40 family protein
BnaA01T0001300ZS	-82928	chrA01	202913	203851	WDL1	WVD2-like 1	unknown	AT3G04630	Protein WVD2-like 1
BnaA01T0002400ZS	-4564	chrA01	281277	281574	SAUR14	SMALL AUXIN UPREGULATED RNA 14	unknown	AT4G38840	SAUR-like auxin-responsive protein family
BnaA01T0004700ZS	97467	chrA01	383308	388678	CESA2	cellulose synthase A2	unknown	AT4G39350	Cellulose synthase A catalytic subunit 2 [UDP-forming]
BnaA01T0004700ZS.1	97467	chrA01	383308	388678	CESA2	cellulose synthase A2	unknown	AT4G39350	Cellulose synthase A catalytic subunit 2 [UDP-forming]
BnaA01T0002100ZS	-45566	chrA01	240275	240789	unknown	unknown	unknown	AT4G38495	CONTAINS InterPro DOMAIN/s: YL1 nuclear%2C C-terminal (InterPro:IPR013272)%3B Has 279 Blast hits to 279 proteins in 147 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 94%3B Fungi - 133%3B Plants - 35%3B Viruses - 0%3B Other Eukaryotes - 17 (source: NCBI BLink).
BnaA01T0002700ZS	7018	chrA01	292859	295957	unknown	unknown	unknown	AT4G38890	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
BnaA01T0002300ZS	-38713	chrA01	247128	247726	unknown	unknown	unknown	unknown	unknown protein
BnaA01T0002900ZS	13022	chrA01	298863	302706	unknown	unknown	unknown	AT4G38950	ATP binding microtubule motor family protein
BnaA01T0004200ZS	82210	chrA01	368051	369992	unknown	unknown	unknown	AT4G39150	DNAJ heat shock N-terminal domain-containing protein
BnaA01T0001900ZS	-54336	chrA01	231505	232577	SSU	small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase	unknown	AT4G38460	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit%2C chloroplastic
BnaA01T0001600ZS	-71430	chrA01	214411	215260	EXPA20	expansin A20	unknown	AT4G38210	Expansin-A20
BnaA01T0003700ZS	72067	chrA01	357908	358350	OXS3	OXIDATIVE STRESS 3	unknown	AT5G56550	oxidative stress 3
BnaA01T0004400ZS	86205	chrA01	372046	372475	RSM2	RADIALIS-LIKE SANT/MYB 2	unknown	AT4G39250	Protein RADIALIS-like 1
BnaA01T0004100ZS	79225	chrA01	365066	366579	unknown	unknown	unknown	AT4G39140	RING/U-box superfamily protein
BnaA01T0001800ZS	-56580	chrA01	229261	230246	EXPL1	EXPANSIN L1	unknown	AT3G45970	Expansin-like A1

Bn-eQTL

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