Bn-eQTL database

Search For eGWAS Data By SNP:

There was no genetic information associated with 40 day 'BnvaA0100392927'

Searched BnvaA0100392927 Results:

20 day associated information:

Gene_name	SNP	SNP_Chr	SNP_ChrPos	PValue
BnaC01T0005900ZS	BnvaA0100392927	chrA01	392927	53.6667

LeadSNP nearby genetic information:

Name	Dist	Chrom	start	end	Symbol	Full_name	TF_family	Ara_gene	Description
BnaA01T0005700ZS	61101	chrA01	454028	455271	unknown	unknown	unknown	AT4G39550	F-box/kelch-repeat protein At4g39550
BnaA01T0006600ZS	91378	chrA01	484305	486689	AGT2	alanine:glyoxylate aminotransferase 2	unknown	AT4G39660	Alanine--glyoxylate aminotransferase 2 homolog 1%2C mitochondrial
BnaA01T0003300ZS	-61208	chrA01	331719	334664	SID1	SALICYLIC ACID INDUCTION DEFICIENT 1	unknown	AT4G39030	Enhanced disease susceptibility 5
BnaA01T0006000ZS.2	70823	chrA01	463750	468523	unknown	unknown	unknown	AT1G62020	Coatomer subunit alpha-1
BnaA01T0006000ZS	70826	chrA01	463753	468410	unknown	unknown	unknown	AT1G62020	Coatomer subunit alpha-1
BnaA01T0006000ZS.1	70826	chrA01	463753	468523	unknown	unknown	unknown	AT1G62020	Coatomer subunit alpha-1
BnaA01T0005400ZS	55348	chrA01	448275	450005	SK2	shikimate kinase 2	unknown	AT4G39540	Shikimate kinase 2%2C chloroplastic
BnaA01T0004300ZS	-22329	chrA01	370598	371241	unknown	unknown	unknown	AT4G39200	40S ribosomal protein S25-4
BnaA01T0003600ZS	-38405	chrA01	354522	356104	RD19A	RESPONSIVE TO DEHYDRATION 19A	unknown	AT4G39090	Cysteine proteinase RD19a
BnaA01T0006400ZS	84419	chrA01	477346	478033	unknown	unknown	unknown	AT4G39630	unknown protein
BnaA01T0003200ZS	-71759	chrA01	321168	324571	GH9B18	glycosyl hydrolase 9B18	unknown	AT4G39010	Endoglucanase 24
BnaA01T0003800ZS	-33830	chrA01	359097	362129	BUPS1	Buddhas Paper Seal 1	unknown	AT4G39110	Probable receptor-like protein kinase At4g39110
BnaA01T0003100ZS	-81879	chrA01	311048	313360	GH9B17	glycosyl hydrolase 9B17	unknown	AT4G39000	Endoglucanase 23
BnaA01T0003400ZS	-51675	chrA01	341252	342698	STH7	SALT TOLERANCE HOMOLOG 7	unknown	AT4G39070	B-box zinc finger protein 20
BnaA01T0004800ZS	-3565	chrA01	389362	390506	unknown	unknown	unknown	AT4G39360	unknown protein
BnaA01T0006300ZS	81153	chrA01	474080	476783	GGT1	gamma-glutamyl transpeptidase 1	unknown	AT4G39640	Gamma-glutamyltranspeptidase 1
BnaA01T0003500ZS	-45162	chrA01	347765	354042	VHA-A3	vacuolar proton ATPase A3	unknown	AT4G39080	V-type proton ATPase subunit a3
BnaA01T0003500ZS.1	-43522	chrA01	349405	354042	VHA-A3	vacuolar proton ATPase A3	unknown	AT4G39080	V-type proton ATPase subunit a3
BnaA01T0003900ZS	-30519	chrA01	362408	363469	IMPL2	myo-inositol monophosphatase like 2	unknown	AT4G39120	myo-inositol monophosphatase like 2
BnaA01T0004600ZS	-13456	chrA01	379471	379864	EC1.4	EGG CELL 1.4	unknown	AT4G39340	Egg cell-secreted protein 1.4
BnaA01T0003000ZS	-88111	chrA01	304816	309858	FBA2	fructose-bisphosphate aldolase 2	unknown	AT4G38970	FBA; Fructose 1,6 bis phosphate aldolase; Plastid; Probable fructose-bisphosphate aldolase 2%2C chloroplastic
BnaA01T0005100ZS	21934	chrA01	414861	419055	WRKY13	WRKY DNA-binding protein 13	unknown	AT4G39410	Probable WRKY transcription factor 13
BnaA01T0002800ZS	-96128	chrA01	296799	297762	BPC5	basic pentacysteine 5	unknown	AT4G38910	Protein BASIC PENTACYSTEINE5
BnaA01T0004500ZS	-17927	chrA01	375000	375760	RBGA6	RNA-binding glycine-rich protein A6	unknown	AT4G39260	Glycine-rich RNA-binding protein 8
BnaA01T0005800ZS	62940	chrA01	455867	457264	unknown	unknown	unknown	AT4G39590	F-box/kelch-repeat protein At4g39590
BnaA01T0005200ZS	32896	chrA01	425823	440999	unknown	unknown	unknown	AT4G39420	unknown protein
BnaA01T0004000ZS	-29240	chrA01	363687	364290	unknown	unknown	unknown	AT4G39130	Dehydrin family protein
BnaA01T0005500ZS	57265	chrA01	450192	451252	unknown	unknown	unknown	AT4G39550	F-box/kelch-repeat protein At4g39550
BnaA01T0005900ZS	67948	chrA01	460875	462123	unknown	unknown	unknown	AT1G61540	Putative F-box/kelch-repeat protein At1g61540
BnaA01T0004700ZS	-9619	chrA01	383308	388678	CESA2	cellulose synthase A2	unknown	AT4G39350	Cellulose synthase A catalytic subunit 2 [UDP-forming]
BnaA01T0004700ZS.1	-9619	chrA01	383308	388678	CESA2	cellulose synthase A2	unknown	AT4G39350	Cellulose synthase A catalytic subunit 2 [UDP-forming]
BnaA01T0006200ZS	77332	chrA01	470259	472812	EMB2453	EMBRYO DEFECTIVE 2453	unknown	AT4G39620	Pentatricopeptide repeat-containing protein At4g39620%2C chloroplastic
BnaA01T0002700ZS	-100068	chrA01	292859	295957	unknown	unknown	unknown	AT4G38890	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
BnaA01T0005300ZS	51358	chrA01	444285	447021	Drg1-1	unknown	unknown	AT4G39520	Developmentally-regulated G-protein 3
BnaA01T0004900ZS	3706	chrA01	396633	397909	URGT4	UDP-Rha/UDP-Gal transporter 4	unknown	AT4G39390	nucleotide sugar transporter-KT 1
BnaA01T0005600ZS	59057	chrA01	451984	453136	unknown	unknown	unknown	AT4G39590	F-box/kelch-repeat protein At4g39590
BnaA01T0006800ZS	97884	chrA01	490811	492841	unknown	unknown	unknown	AT4G39680	SAP domain-containing protein
BnaA01T0002900ZS	-94064	chrA01	298863	302706	unknown	unknown	unknown	AT4G38950	ATP binding microtubule motor family protein
BnaA01T0004200ZS	-24876	chrA01	368051	369992	unknown	unknown	unknown	AT4G39150	DNAJ heat shock N-terminal domain-containing protein
BnaA01T0006500ZS	85662	chrA01	478589	481597	GGT1	gamma-glutamyl transpeptidase 1	unknown	AT4G39640	Gamma-glutamyltranspeptidase 1
BnaA01T0003700ZS	-35019	chrA01	357908	358350	OXS3	OXIDATIVE STRESS 3	unknown	AT5G56550	oxidative stress 3
BnaA01T0004400ZS	-20881	chrA01	372046	372475	RSM2	RADIALIS-LIKE SANT/MYB 2	unknown	AT4G39250	Protein RADIALIS-like 1
BnaA01T0004100ZS	-27861	chrA01	365066	366579	unknown	unknown	unknown	AT4G39140	RING/U-box superfamily protein
BnaA01T0005000ZS	11461	chrA01	404388	408308	DWF2	DWARF 2	unknown	AT4G39400	Protein BRASSINOSTEROID INSENSITIVE 1
BnaA01T0006700ZS	97121	chrA01	490048	490264	unknown	unknown	unknown	AT4G39675	unknown protein
BnaA01T0006100ZS	76165	chrA01	469092	469740	unknown	unknown	unknown	AT1G36622	unknown protein

Bn-eQTL

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