P
lant
C
omparative
M
etabolome
D
atabase
——A multi-level comparison database based on predicted metabolic profiles in 530 plant species
e.g.
alpha-solanine
or
Arabidopsis thaliana
or
RXN-13489
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Species list
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Metabolites
Search metabolites
Search structure
Search molecular weight
Metabolites-enrichment
ID conversion
Metabolites-comparison
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Reactions
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Literature
Literature
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Tutorial
Methods
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Input metabolites
Tips:
PCMD assesses the enrichment of specific metabolites in various plants through hypergeometric tests. Detailed methods can be found on the
Methods
page.
Please input metabolite names or IDs in PCMD. Metabolites are separated by "\n" or ";" or ",". Be mindful that the file should contain just metabolites if you upload it.
e.g.
example data
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Basic information of metabolites
Id
Descprition
Structure
Formula
Molecular weight
Monoisotopic mass
Species
Classification of metabolites by PCMD
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Class 1
Class 2
Class 3
Class 4
Amborella trichopoda
Actinidia chinensis
Arabidopsis lyrata
Hordeum vulgare goldenpromise
Distribution of metabolites in 530 species
These metabolites are included in
n
of the 530 species, which is
100%
of all species.
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Species with the input metabolite
Enrichment of metabolites in 530 species
Species
Metabolites number ratio
BgRatio
Counts
P-value
Literature
There
is/are
relevant literature.
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Structure
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