BjuIR

Brassica juncea Information Resource

A multi-omics database with various tools for accelerating functional genomics research in Brassica juncea
e.g. BjuVA08G37910 or AT1G03630 or PORC

Phenomics

In the "Phenomics" module, we collected 16 traits of 628 accessions, including 16 traits of 151 inbred lines (Harper et al., 2020), one trait of 477 accessions (Kang et al., 2021). These phenotypic data are grouped into 4 types (seed quality traits, flowering time, maturity time, agronomic traits), and users can browse these phenotypic data in this module.
Trait Number of accessions Source
Alpha-tocopherol content 151 (Harper et al., 2020)
Delta-tocopherol content 151 (Harper et al., 2020)
Gamma-tocopherol divided by Alpha-tocopherol 151 (Harper et al., 2020)
Gamma-tocopherol content 151 (Harper et al., 2020)
Oil content 151 (Harper et al., 2020)
Seed colour 151 (Harper et al., 2020)
Seed colour 477 (Kang et al., 2021)
Seed number per pod 151 (Harper et al., 2020)
Thousand seed weight 151 (Harper et al., 2020)
Total tocopherol content 151 (Harper et al., 2020)
Days to flower 151 (Harper et al., 2020)
Days to maturity 150 (Harper et al., 2020)
Plant height 151 (Harper et al., 2020)
Pod length 151 (Harper et al., 2020)
Pod number on the main raceme 151 (Harper et al., 2020)
Primary branches number 151 (Harper et al., 2020)
Secondary branches number 149 (Harper et al., 2020)
References
1. Harper, A.L., He, Z., Langer, S., Havlickova, L., Wang, L., Fellgett, A., Gupta, V., Kumar Pradhan, A. and Bancroft, I. (2020). Validation of an associative transcriptomics platform in the polyploid crop species Brassica juncea by dissection of the genetic architecture of agronomic and quality traits. Plant J. 103: 1885-1893.
2. Kang, L., Qian, L., Zheng, M., Chen, L., Chen, H., Yang, L., You, L., Yang, B., Yan, M., Gu, Y. et al. (2021). Genomic insights into the origin, domestication and diversification of Brassica juncea. Nat. Genet. 53: 1392-1402.
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