We performed a careful literature survey, and
459,
71, and
112 reported flowering genes were curated in
Arabidopsis
thaliana,
Glycine max, and
Oryza sativa, respectively. Candidate flowering genes in other
species were identified by using a combination of sequence similarity and conserved domain based
approaches. A total of
82,104 candidate flowering genes were obtained. In the “Search” module, users can retrieve
candidate flowering genes through five dimensions. The “
Search by species ” page provides the detailed description for each species, together with the
global statistics, functional annotation, distribution, and gene family classification for the candidate
flowering genes. The “
Search by reported
flowering
genes” page can conveniently retrieve
candidate flowering gene information. On the “
Search by gene family
” and “
Search by Pfam family
” pages, the statistics, distribution, comparison and sequence information of the specific gene
or Pfam family among 112 species can be obtained.On the “
Search by sequence
” pages, users can obtain the
highest
similarity of candidate flowering genes by entering the unknown nucleic acid or protein sequences.
The external links of “Variation” and “Expression” in “Search by species” page allow users direct access to the
corresponding gene information page. There are 16 species that can directly link to the gene expression page of
ePlant (Waese et al., 2017), BnIR (Yang et al., 2023), CuGenDBv2 (Yu et al., 2023), WheatOmics 1.0 (Ma et al.,
2021), and MaizeGDB (Lawrence et al., 2004). Moreover, 10 species that can directly link to the gene variation
page of Plant-ImputeDB (Gao et al., 2021), BnIR, CuGenDBv2, RiceVarMap 2.0 (Zhao et al., 2021) and Sol Genomics
Network
(https://solgenomics.net/).