CottonMD

A Multiomics Database for cotton biological study

SMR (Summary data-based Mendelian randomization analysis)

    SMR (Summary data-based Mendelian randomization analysis) is an method based on multi-omics, which integrates summary-level data from GWAS with data from expression quantitative trait locus (eQTL) studies to identify genes whose expression levels are associated with a complex trait because of pleiotropy.
   

Navigational Manhattan Plot (Trait: )

You can move the mouse over the gene of interest and click it to browse the SMR results and annotation information for this gene.

List of significant SMR loc (Trait: )

Selector Gene ID P(SMR) P(HEIDI) P(GWAS) P(eQTL) AtGI At Name Function

Submit the selected item in the table to obtain specific SMR information.

Search by gene ID/region (Trait: )

?

e.g. LEW3 or AT2G40190 or Ghi_A01G00591 or ES319_D05G002100v1.

?

e.g. A10:11000000..12000000

?

e.g. Ghi_D06G03201 or Ghi_A05G15916,Ghi_A08G11931
   
Page Counter
MaGenDB
CottonFGD

Copyright © 2021-2031 All rights reserved. Contact us: yqy@mail.hzau.edu.cn